Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015937926.1_cds_XP_016482984.1_74149
CDS Infomation	[gene=LOC107803733] [db_xref=GeneID:107803733] [protein=putative E3 ubiquitin-protein ligase RF298 isoform X2] [protein_id=XP_016482984.1] [location=complement(join(60911..61414,61956..63896))] [gbkey=CDS]
Sequence	ATGATCGTTGAAAAGAAAATGAACATGGTGAATCATAACAGCGGTGAATGTGCTGATGAG AAGTCATTGGCAATATCAGCGCAGGAAAAAGGAAGTAGGAACAAGAGGAAATTCTTATCT GAGTCTCCTCTAGATATTCCTGTTGATGCACCTGCCCTGTCCCTTACTGAATTTCCTAGA TATGAATTATTAGAGGAAAAACATCAAAGCACACCTAACGGGGTCGGTTCACTCGAGGGT AGGTGTCATAAGTCCAATGAGAAACAAGGAGTGGAAACCTTACAACACGCCGACTGGGAC GATACAATAGCATGTCAGCTAATGGAACTTTTATTTCATAACTTGTCCGCAACTTTCCAA AGCGCAATCAAAAGGATTGTTGAATGCGGATATAGTGAGGAAATAGCTGAATGGGTCATT TTAAGGAGTGGCCTTTATCACGGTAGCAAGGATGCTGTCTCAACTATTGTTGACGGTGCC TTGGCTCTACTAAGTAGGGAAAAAGAATTGGATTCCTCTACACCTCTCATATTTGAGGAT TTAAATAGCCTGGTTGAGTACACTATGTTGGAGATGATATGCGTGCTGAGGGAGGTTAAG CCAGCTTTTACCGTCGCAGAAGCAATGTGGTGCCTTTTAATATGTGATCTGAACCTGTTA CATGCATGCGCCATAGAAGGAGATCTTCTGGGCGAGCTATGCGGTTTAGAAAGTCCACGA GAAAGCTCATCTGGTTCAAAATTTGCTCAAACAAAGGAGGCTTCTGAAGTGATTCAATCG AACATGGATAATAAACTACAATCGTCAAAACCTTCAATGCCGATTGCTCAAAGTTTGCAT TCTGAAGTTCCATGTGCCGATGTAATCGCTCAATTGCAGGAGTCCATATACTCACATCTT CATGAAGTGGGAATTACAGGGAACGAGAGTTCCTCAGGGCTTATCAGGGAGAATATATTG TCTTTGTCGAAAGCAGCAATTTTAGAAGACAAATCTGGAACTGCGAAAAGGGGGTCGTCT AAGAAGGATATTCTTAGGCAAAAGTCATTTCATTTCGAGAAAAGCTACAAAGGTCGTATG GGTAAGGGTTCCTTTAAAGCGAAACTCACCACCTGGGGCAGTATGGTTTTGGACAAGACG CTCAACTCTGAATCTGGTTCTTCTGGTTTTGTAATGAAGAGTACTTACTCTAAGGTAACG GCTTCACTTAAAACCAATGGTCCTTTAGCAGAAGGAAGCTCTCATAGTTCAAGCACCTCC CCGTCCATCGCACCTTCAAGTGAAACTTCTAGTGTGCAACCGACTCAAGATACTATTTGT GCATTGCCTGCTGTTAACACAAATACCCTTGCTGTTGTAGACTATTACGCTGGTATTCCG TACGATGAGTCTTTGGGCAAACATGTCCCACAAAATGAGAAAGATGAAACTATATTGTTG CTAATTTCCCGTATGCAGACGCTGCAGAAAGAGCTCCAAGGGTGGACTGATTGGGCCAAT GAGAAGGTTATGCAGGCCGCTCGGAGGCTTGGAAAGGACAAGGGGGAGCTTAAAATGCTG AGGCAAGAGAAAGAAGAGGCTGAGAAGTCTCAGAAGGAGAAGCAAATGGTGGAGGAAAAC ACCACGAAGAGGCTTTCTGAAATGGAGTATGCATTGTCAAATGCCAGTGGCCAGATTAAG ATGGCTAACTCTTCTCTTCGCAGACTTGAGGTGGAGAATGCTGTGCTAAAGAAGGAGATG GAGGCTGCGAAGCTGGCTGCCGTGGCATCTGCTACAAACTTCCACCAAGCTGTTGCAAGG GAGAAAGAGATATTGAAGAAGTGTCAAGCATGGGAGATAGAGAAGGGCTCACTGCAGGAC GACTTCTCTACCCTGAAGCAAAAAGCAGCTCATTTGGAGCAGGAACTTGAGAGAGCCAAA AAGCGCCAGAACCAGTTTAAGGCTCTGTCGGAGCAGGAGGAGAGGGGGAAACAAAGGGTT CTTCAGCAGGCTGATTCCGTTAAGGCTGAAAGGGAGCAATGGGGAGTTGAGAGTAAAATG GAGGAGGATAATATGAGAGAAATGGCAGAGAGCAACATGCAAAAGTGTAAAGAAGATATC CGAAAGCTTGAGAGTGAAATTGCTCGATTGAGATTGCAGTCTGAAGGTTCAAAAATAGAG GCACTTCGAAGAGGCATCGACACGAGGCTGCAGTCTCCTAAAATCACAAAGAACTCTGCA CTCTTTGACGACAATTTTGGCTCTAGAAGTGTGGAAATGGAAAGGGAATGTGTTATGTGT TTGACCGAGGAAATGTCAGTGGTTTTCCTCCCGTGTGCCCATCAGGTTCTTTGTGGACAA TGCAACGTGCTTCACGAAAAGCAAGGAATGAACGACTGTCCTTCTTGTAGGACGCCAATT AAGAAGCGGATTAATGTTCGATTTGCTCATTCTTTTAGCAGTTAG

Peptide Sequence

PEP ID	XP_016482984.1
PEP Infomation	PREDICTED: putative E3 ubiquitin-protein ligase RF298 isoform X2 [Nicotiana tabacum]
Sequence	MIVEKKMNMVNHNSGECADEKSLAISAQEKGSRNKRKFLSESPLDIPVDAPALSLTEFPR YELLEEKHQSTPNGVGSLEGRCHKSNEKQGVETLQHADWDDTIACQLMELLFHNLSATFQ SAIKRIVECGYSEEIAEWVILRSGLYHGSKDAVSTIVDGALALLSREKELDSSTPLIFED LNSLVEYTMLEMICVLREVKPAFTVAEAMWCLLICDLNLLHACAIEGDLLGELCGLESPR ESSSGSKFAQTKEASEVIQSNMDNKLQSSKPSMPIAQSLHSEVPCADVIAQLQESIYSHL HEVGITGNESSSGLIRENILSLSKAAILEDKSGTAKRGSSKKDILRQKSFHFEKSYKGRM GKGSFKAKLTTWGSMVLDKTLNSESGSSGFVMKSTYSKVTASLKTNGPLAEGSSHSSSTS PSIAPSSETSSVQPTQDTICALPAVNTNTLAVVDYYAGIPYDESLGKHVPQNEKDETILL LISRMQTLQKELQGWTDWANEKVMQAARRLGKDKGELKMLRQEKEEAEKSQKEKQMVEEN TTKRLSEMEYALSNASGQIKMANSSLRRLEVENAVLKKEMEAAKLAAVASATNFHQAVAR EKEILKKCQAWEIEKGSLQDDFSTLKQKAAHLEQELERAKKRQNQFKALSEQEERGKQRV LQQADSVKAEREQWGVESKMEEDNMREMAESNMQKCKEDIRKLESEIARLRLQSEGSKIE ALRRGIDTRLQSPKITKNSALFDDNFGSRSVEMERECVMCLTEEMSVVFLPCAHQVLCGQ CNVLHEKQGMNDCPSCRTPIKKRINVRFAHSFSS

Transcript Sequence

Gene sequence data has not been registered.